Function reference • bleutils

Manipulating Core Program data

Functions for common tasks regarding BLE’s Core Program data

add_cp_cols(): Add columns relevant to BLE LTER Core Program Add columns: station name, lat/lon, habitat type, given BLE LTER Core Program station code

update_cp_stations(): Compare the station information to "canonical" source in Box and update if needed. Meant to be run occassionally from An's PC and within the bleutils Rproject to update the version of station info that this package uses to append new columns, for example.

infer_season(): Infer BLE LTER field campaign season from date or date-times

order_cp_cols(): Order Core Program data columns

sort_cp_rows(): Sort Core Program data

Other useful IM tasks

Functions for common tasks BLE IM team might need

init_datapkg(): Create folder structure for a new BLE LTER data package ID Create these following items: folder structure, R project, reusable R script from template

init_script(): Generate R processing script from template

append_units(): Append units to column names

rename_attributes(): Rename data columns according to metadata.

export_personnel(): Connect to metabase and query for personnel list.

Datasets included with the package

cp_data: example of BLE LTER Core Program data with various formatting issues. use to test functions in this package

stations: BLE LTER Core Program, information on core sampling stations